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  • Top cofit genes for GFF5428 from Variovorax sp. SCN45

    YaeQ protein
    SEED: YaeQ protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6809 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.55
    2 GFF1693 Acetoacetyl-CoA reductase (EC 1.1.1.36) no 0.53
    3 GFF6448 Glucans biosynthesis protein D precursor 0.42 0.52
    4 GFF4874 Plasmid replication initiator protein no 0.52
    5 GFF5393 mandelate racemase/muconate lactonizing enzyme family protein no 0.52
    6 GFF6088 Phenylacetic acid degradation protein PaaY no 0.52
    7 GFF6737 Uncharacterized aldehyde oxidase, 2Fe-2S subunit no 0.52
    8 GFF4397 hypothetical protein no 0.51
    9 GFF4356 Alpha-methylacyl-CoA racemase (EC 5.1.99.4) no 0.51
    10 GFF4089 Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) 0.40 0.51
    11 GFF4003 FIGfam005179 no 0.51
    12 GFF5402 Transcriptional regulator, IclR family no 0.50
    13 GFF6805 FIG00821908: hypothetical protein no 0.50
    14 GFF4810 Ferrichrome-iron receptor no 0.50
    15 GFF2683 Protein containing domains DUF404, DUF407 no 0.50
    16 GFF4373 FIG131328: Predicted ATP-dependent endonuclease of the OLD family no 0.49
    17 GFF5605 D-xylose ABC transporter, ATP-binding protein XylG no 0.49
    18 GFF6125 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) 0.34 0.49
    19 GFF5940 T6SS associated component TagJ (ImpE) no 0.49
    20 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) no 0.48

    Or look for negative cofitness