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Cofit
Protein
Homologs
Top cofit genes for GFF5417 from
Variovorax sp. SCN45
hypothetical protein
KEGG: type IV pilus assembly protein PilX
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5418
Type IV fimbrial biogenesis protein PilY1
no
1.00
2
GFF2509
Type IV fimbrial assembly protein PilC
no
1.00
3
GFF5419
Type IV pilus biogenesis protein PilE
no
1.00
4
GFF5319
Type IV pilus biogenesis protein PilM
no
1.00
5
GFF5323
Type IV pilus biogenesis protein PilQ
no
0.99
6
GFF5490
Uncharacterized protein with LysM domain, COG1652
no
0.99
7
GFF5416
Type IV fimbrial biogenesis protein PilW
no
0.99
8
GFF5321
Type IV pilus biogenesis protein PilO
no
0.99
9
GFF993
Type IV pilus biogenesis protein PilF
no
0.99
10
GFF5414
hypothetical protein
no
0.99
11
GFF2510
Type IV fimbrial assembly, ATPase PilB
no
0.99
12
GFF5322
Type IV pilus biogenesis protein PilP
no
0.99
13
GFF5415
Type IV fimbrial biogenesis protein PilV
no
0.99
14
GFF5320
Type IV pilus biogenesis protein PilN
no
0.99
15
GFF33
Type IV pilus biogenesis protein PilZ
no
0.99
16
GFF2519
FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
no
0.99
17
GFF3826
Response regulator receiver:LytTr DNA-binding region
no
0.99
18
GFF2508
Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-)
no
0.99
19
GFF3068
FIG00538108: hypothetical protein
no
0.99
20
GFF6075
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
no
0.98
Or look for
negative cofitness