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  • Top cofit genes for GFF5412 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4432 Two-component system response regulator protein no 0.95
    2 GFF5490 Uncharacterized protein with LysM domain, COG1652 no 0.95
    3 GFF5419 Type IV pilus biogenesis protein PilE no 0.95
    4 GFF5323 Type IV pilus biogenesis protein PilQ no 0.95
    5 GFF5417 hypothetical protein no 0.95
    6 GFF3826 Response regulator receiver:LytTr DNA-binding region no 0.95
    7 GFF5418 Type IV fimbrial biogenesis protein PilY1 no 0.95
    8 GFF2509 Type IV fimbrial assembly protein PilC no 0.95
    9 GFF5319 Type IV pilus biogenesis protein PilM no 0.94
    10 GFF5322 Type IV pilus biogenesis protein PilP no 0.94
    11 GFF5321 Type IV pilus biogenesis protein PilO no 0.94
    12 GFF33 Type IV pilus biogenesis protein PilZ no 0.94
    13 GFF5416 Type IV fimbrial biogenesis protein PilW no 0.94
    14 GFF2510 Type IV fimbrial assembly, ATPase PilB no 0.94
    15 GFF3068 FIG00538108: hypothetical protein no 0.94
    16 GFF993 Type IV pilus biogenesis protein PilF no 0.94
    17 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) no 0.94
    18 GFF5320 Type IV pilus biogenesis protein PilN no 0.94
    19 GFF2154 twitching motility protein PilJ no 0.94
    20 GFF3886 Putative transmembrane protein no 0.94

    Or look for negative cofitness