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  • Top cofit genes for GFF5408 from Variovorax sp. SCN45

    Protein serine/threonine phosphatase PrpC, regulation of stationary phase
    SEED: Protein serine/threonine phosphatase PrpC, regulation of stationary phase
    KEGG: protein phosphatase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5429 Iron(III) dicitrate transport protein FecA no 0.76
    2 GFF2506 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) 0.62 0.73
    3 GFF531 hypothetical protein no 0.72
    4 GFF2354 FIG00555615: hypothetical protein 0.60 0.70
    5 GFF969 ATP-dependent protease HslVU (ClpYQ), peptidase subunit no 0.64
    6 GFF5002 ABC-type branched-chain amino acid transport systems, periplasmic component 0.46 0.64
    7 GFF2505 hypothetical protein no 0.64
    8 GFF2152 twitching motility protein PilH 0.62 0.63
    9 GFF6392 hypothetical protein 0.59 0.62
    10 GFF375 hypothetical protein no 0.62
    11 GFF494 RND efflux system, membrane fusion protein no 0.59
    12 GFF493 RND efflux system, inner membrane transporter no 0.56
    13 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) 0.73 0.55
    14 GFF4408 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type no 0.54
    15 GFF2830 Uncharacterized protein CC_3061 no 0.54
    16 GFF5817 Two-component system sensor histidine kinase no 0.53
    17 GFF5347 hypothetical protein no 0.53
    18 GFF7265 hypothetical protein, not 6-phosphogluconolactonase no 0.53
    19 GFF3186 FIG01046500: hypothetical protein no 0.53
    20 GFF456 Transcriptional regulator, AraC family no 0.52

    Or look for negative cofitness