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  • Top cofit genes for PS417_27660 from Pseudomonas simiae WCS417

    multidrug transporter
    SEED: Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog
    KEGG: multidrug resistance protein, MATE family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_21375 ADP-ribosylglycohydrolase no 0.24
    2 PS417_16970 membrane protein 0.20 0.19
    3 PS417_06780 TetR family transcriptional regulator no 0.19
    4 PS417_27145 TetR family transcriptional regulator 0.51 0.18
    5 PS417_15100 BatB protein no 0.18
    6 PS417_02055 methyltransferase 0.51 0.18
    7 PS417_07615 TetR family transcriptional regulator no 0.18
    8 PS417_07120 RNA polymerase sigma-H factor 0.36 0.18
    9 PS417_07405 hypothetical protein no 0.18
    10 PS417_05135 nucleoid-associated protein no 0.17
    11 PS417_24895 hypothetical protein no 0.17
    12 PS417_17275 hypothetical protein no 0.17
    13 PS417_23205 transcriptional regulator no 0.17
    14 PS417_15105 membrane protein 0.34 0.16
    15 PS417_03910 pilus assembly protein no 0.16
    16 PS417_21065 3-methylitaconate isomerase 0.10 0.16
    17 PS417_02405 hypothetical protein no 0.16
    18 PS417_13125 ATP-dependent DNA ligase 0.51 0.16
    19 PS417_12835 GNAT family acetyltransferase no 0.16
    20 PS417_23820 hypothetical protein no 0.16

    Or look for negative cofitness