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    • Top cofit genes for GFF5402 from Variovorax sp. SCN45

    Transcriptional regulator, IclR family
    SEED: Transcriptional regulator, IclR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein no 0.77
    2 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) no 0.72
    3 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.71
    4 GFF335 Cytosine deaminase (EC 3.5.4.1) no 0.70
    5 GFF4691 Cobalt/zinc/cadmium resistance protein CzcD no 0.69
    6 GFF7322 hypothetical protein no 0.69
    7 GFF4373 FIG131328: Predicted ATP-dependent endonuclease of the OLD family no 0.67
    8 GFF2752 FIG00974677: hypothetical protein no 0.66
    9 GFF2311 Putative PRS2 protein no 0.66
    10 GFF6637 Putative amidase amiC (EC 3.5.1.4) no 0.65
    11 GFF2683 Protein containing domains DUF404, DUF407 no 0.64
    12 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family no 0.64
    13 GFF2201 hypothetical protein no 0.63
    14 GFF5994 Chlorogenate esterase no 0.62
    15 GFF7085 BUG/TctC family periplasmic protein no 0.62
    16 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) no 0.61
    17 GFF6278 Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) no 0.60
    18 GFF2593 Integral membrane protein no 0.60
    19 GFF1124 no description no 0.60
    20 GFF2406 DipZ protein no 0.60

    Or look for negative cofitness