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  • Top cofit genes for GFF5392 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5992 BUG/TctC family periplasmic protein no 0.53
    2 GFF2484 Urease beta subunit (EC 3.5.1.5) 0.18 0.53
    3 GFF3994 hypothetical protein no 0.51
    4 GFF5947 Large extracellular alpha-helical protein no 0.50
    5 GFF3822 RND efflux system, membrane fusion protein no 0.50
    6 GFF4222 Butyryl-CoA dehydrogenase (EC 1.3.99.2) no 0.50
    7 GFF6286 Probable signal peptide protein no 0.49
    8 GFF1172 hypothetical protein no 0.49
    9 GFF2617 no description no 0.49
    10 GFF67 Glycosyl transferase, group 1 no 0.48
    11 GFF5878 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) no 0.47
    12 GFF2687 Protein containing domains DUF404, DUF407, DUF403 0.55 0.47
    13 GFF3460 Urea ABC transporter, ATPase protein UrtE no 0.47
    14 GFF6147 Phosphonoacetaldehyde dehydrogenase (NAD+) no 0.46
    15 GFF6288 L-lysine permease no 0.46
    16 GFF6938 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.46
    17 GFF3879 Uncharacterized protein, similar to the N-terminal domain of Lon protease no 0.44
    18 GFF1049 low-specificity D-threonine aldolase no 0.44
    19 GFF1373 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) no 0.44
    20 GFF793 Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system no 0.44

    Or look for negative cofitness