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  • Top cofit genes for GFF5380 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5073 3-oxoacyl-[ACP] synthase no 0.55
    2 GFF4248 Similar to eukaryotic Peptidyl prolyl 4-hydroxylase, alpha subunit (EC 1.14.11.2) no 0.53
    3 GFF2991 BUG/TctC family periplasmic protein no 0.52
    4 GFF1831 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 3 no 0.50
    5 GFF4847 Conjugative transfer protein TrbD no 0.47
    6 GFF3607 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47
    7 GFF1262 Rhodanese-related sulfurtransferase no 0.47
    8 GFF1404 hypothetical protein no 0.47
    9 GFF7356 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.46
    10 GFF3585 Sulfate transport system permease protein CysT no 0.46
    11 GFF3779 hypothetical protein no 0.45
    12 GFF5216 Metal dependent phosphohydrolase no 0.45
    13 GFF3071 ADP-ribose pyrophosphatase of COG1058 family (EC 3.6.1.13) no 0.45
    14 GFF461 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.45
    15 GFF3508 Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system no 0.44
    16 GFF3287 hypothetical protein no 0.44
    17 GFF4277 Small subunit naph/bph dioxygenase no 0.44
    18 GFF6678 Putative inner membrane protein no 0.43
    19 GFF3030 Uncharacterized protein ImpA no 0.43
    20 GFF5498 Uncharacterized protein SPO0681 no 0.43

    Or look for negative cofitness