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  • Top cofit genes for PS417_02740 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Glycine cleavage system transcriptional activator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_12180 ABC transporter substrate-binding protein no 0.24
    2 PS417_19515 histidine kinase no 0.21
    3 PS417_24460 hypothetical protein no 0.21
    4 PS417_27275 hypothetical protein 0.27 0.20
    5 PS417_19635 lipid kinase no 0.20
    6 PS417_08305 transcriptional regulator no 0.19
    7 PS417_17440 beta-lactamase no 0.19
    8 PS417_02165 ZapA no 0.19
    9 PS417_14650 chemotaxis protein no 0.18
    10 PS417_05295 DeoR faimly transcriptional regulator no 0.18
    11 PS417_01015 polar amino acid ABC transporter permease no 0.18
    12 PS417_05710 hypothetical protein 0.21 0.17
    13 PS417_19585 acyl-CoA dehydrogenase no 0.17
    14 PS417_05475 arginase no 0.17
    15 PS417_13100 ABC transporter ATP-binding protein 0.27 0.17
    16 PS417_02895 precorrin-6Y C5,15-methyltransferase no 0.17
    17 PS417_07210 allantoate amidohydrolase no 0.17
    18 PS417_08110 methylthioribose-1-phosphate isomerase no 0.17
    19 PS417_21840 chemotaxis protein no 0.17
    20 PS417_26295 gamma-butyrobetaine dioxygenase no 0.17

    Or look for negative cofitness