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  • Top cofit genes for PS417_27535 from Pseudomonas simiae WCS417

    chemotaxis protein CheY
    SEED: Autolysis response regulater LytR
    KEGG: two-component system, LytT family, response regulator AlgR

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_16990 acyl-CoA dehydrogenase 0.95 0.47
    2 PS417_01710 histidine utilization repressor 0.78 0.46
    3 PS417_22125 porin no 0.46
    4 PS417_00335 cytochrome B561 0.27 0.45
    5 PS417_16005 ATPase 0.33 0.43
    6 PS417_14920 CoA-transferase 0.86 0.43
    7 PS417_04340 ribosome hibernation promoting factor HPF 0.52 0.43
    8 PS417_12120 IclR family transcriptional regulator no 0.40
    9 PS417_22780 XRE family transcriptional regulator 0.61 0.39
    10 PS417_04270 ribonuclease G 0.56 0.39
    11 PS417_00305 cytochrome oxidase subunit I 0.38 0.39
    12 PS417_26235 (Fe-S)-binding protein 0.71 0.38
    13 PS417_25835 hypothetical protein 0.24 0.37
    14 PS417_03310 carbonate dehydratase 0.14 0.37
    15 PS417_13800 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase no 0.37
    16 PS417_24655 hypothetical protein no 0.37
    17 PS417_26230 electron transfer flavoprotein subunit alpha 0.62 0.37
    18 PS417_12695 mannitol dehydrogenase 0.85 0.36
    19 PS417_27305 5-formyltetrahydrofolate cyclo-ligase 0.54 0.36
    20 PS417_12205 hypothetical protein 0.23 0.35

    Or look for negative cofitness