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  • Top cofit genes for GFF5377 from Variovorax sp. SCN45

    Transcriptional regulator, AcrR family
    SEED: transcriptional regulator, TetR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF785 Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system no 0.55
    2 GFF3777 Prolyl endopeptidase (EC 3.4.21.26) no 0.52
    3 GFF5103 Class II aldolase/adducin, N-terminal no 0.52
    4 GFF1222 Methylglyoxal synthase (EC 4.2.3.3) no 0.52
    5 GFF6816 SAM-dependent methyltransferase no 0.51
    6 GFF3876 UTP pyrophosphatase (EC 3.6.1.9) no 0.50
    7 GFF325 Nucleoside ABC transporter, substrate-binding protein no 0.50
    8 GFF4563 Ferredoxin, 2Fe-2S no 0.49
    9 GFF6613 no description no 0.48
    10 GFF3610 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.48
    11 GFF5583 Transcriptional regulator PA0181, LysR family no 0.47
    12 GFF5600 no description no 0.47
    13 GFF6539 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.47
    14 GFF429 RND efflux system, inner membrane transporter no 0.47
    15 GFF4185 RNA polymerase ECF-type sigma factor no 0.47
    16 GFF5499 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases no 0.47
    17 GFF3429 Transcriptional regulator, AraC family no 0.47
    18 GFF421 hypothetical protein no 0.46
    19 GFF5014 Acyl-CoA dehydrogenase no 0.46
    20 GFF1853 no description no 0.46

    Or look for negative cofitness