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  • Top cofit genes for PS417_27515 from Pseudomonas simiae WCS417

    heme biosynthesis protein HemY
    SEED: Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives)
    KEGG: HemY protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_27520 uroporphyrin-III methyltransferase 0.93 0.41
    2 PS417_01955 peptidase 0.65 0.41
    3 PS417_19690 histidine kinase no 0.37
    4 PS417_00045 glycerol acyltransferase 0.54 0.36
    5 PS417_19650 chemotaxis protein CheW no 0.35
    6 PS417_13870 hypothetical protein 0.50 0.34
    7 PS417_19660 cobalamin biosynthesis protein CobQ 0.51 0.34
    8 PS417_20095 hypothetical protein no 0.34
    9 PS417_20105 glycosyl transferase no 0.34
    10 PS417_19840 flagellar cap protein FliD 0.74 0.34
    11 PS417_19850 branched-chain alpha-keto acid dehydrogenase subunit E2 no 0.34
    12 PS417_19665 flagellar motor protein MotD 0.37 0.34
    13 PS417_27185 porin 0.38 0.33
    14 PS417_19860 flagellar hook protein FlgL 0.27 0.33
    15 PS417_19830 flagellar assembly protein FliT 0.48 0.33
    16 PS417_05635 membrane protein 0.53 0.33
    17 PS417_21575 chemotaxis protein 0.28 0.33
    18 PS417_21595 flagellar biosynthesis protein FlgN no 0.33
    19 PS417_05885 potassium transporter Kup 0.77 0.33
    20 PS417_19865 flagellar hook protein FlgK 0.34 0.33

    Or look for negative cofitness