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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF5352 from
Variovorax sp. SCN45
Split AAA-ATPase protein PA0787
SEED: putative RecF protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4167
ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines)
no
0.63
2
GFF6769
Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
no
0.62
3
GFF3692
ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose)
0.48
0.57
4
GFF1414
Circadian clock protein KaiC
no
0.57
5
GFF6444
no description
no
0.55
6
GFF3847
LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24)
0.36
0.54
7
GFF3591
Glutathione reductase (EC 1.8.1.7)
0.27
0.53
8
GFF6575
Conjugative transfer protein TrbJ
no
0.53
9
GFF2541
FIG00899427: hypothetical protein
no
0.53
10
GFF3081
no description
no
0.53
11
GFF7145
Transcriptional regulator, GntR family
no
0.52
12
GFF849
putative carboxylesterase
no
0.52
13
GFF5088
hypothetical protein
no
0.51
14
GFF2276
Chlorogenate esterase
no
0.51
15
GFF3398
benzoate degradation ring-cleavage hydrolase
no
0.50
16
GFF3037
no description
no
0.50
17
GFF5262
Ferric iron ABC transporter, iron-binding protein
0.50
0.50
18
GFF5264
Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1)
0.40
0.50
19
GFF6891
Phenazine biosynthesis protein PhzF like
no
0.49
20
GFF1353
Short-chain dehydrogenase/reductase SDR
0.32
0.49
Or look for
negative cofitness