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  • Top cofit genes for GFF5352 from Variovorax sp. SCN45

    Split AAA-ATPase protein PA0787
    SEED: putative RecF protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4167 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.63
    2 GFF6769 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases no 0.62
    3 GFF3692 ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) 0.48 0.57
    4 GFF1414 Circadian clock protein KaiC no 0.57
    5 GFF6444 no description no 0.55
    6 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) 0.36 0.54
    7 GFF3591 Glutathione reductase (EC 1.8.1.7) 0.27 0.53
    8 GFF6575 Conjugative transfer protein TrbJ no 0.53
    9 GFF2541 FIG00899427: hypothetical protein no 0.53
    10 GFF3081 no description no 0.53
    11 GFF7145 Transcriptional regulator, GntR family no 0.52
    12 GFF849 putative carboxylesterase no 0.52
    13 GFF5088 hypothetical protein no 0.51
    14 GFF2276 Chlorogenate esterase no 0.51
    15 GFF3398 benzoate degradation ring-cleavage hydrolase no 0.50
    16 GFF3037 no description no 0.50
    17 GFF5262 Ferric iron ABC transporter, iron-binding protein 0.50 0.50
    18 GFF5264 Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) 0.40 0.50
    19 GFF6891 Phenazine biosynthesis protein PhzF like no 0.49
    20 GFF1353 Short-chain dehydrogenase/reductase SDR 0.32 0.49

    Or look for negative cofitness