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  • Top cofit genes for PS417_27390 from Pseudomonas simiae WCS417

    ABC transporter permease
    SEED: amino acid ABC transporter, permease protein
    KEGG: polar amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_20435 membrane protein no 0.22
    2 PS417_21795 ABC transporter substrate-binding protein no 0.22
    3 PS417_28535 TonB-dependent receptor no 0.21
    4 PS417_12275 2,4-dienoyl-CoA reductase no 0.21
    5 PS417_20550 hypothetical protein no 0.20
    6 PS417_20295 RNA-directed DNA polymerase no 0.19
    7 PS417_23635 membrane protein no 0.18
    8 PS417_20400 hypothetical protein no 0.18
    9 PS417_12720 hypothetical protein no 0.17
    10 PS417_17635 hemolysin secretion protein D 0.22 0.17
    11 PS417_05045 acetamidase no 0.17
    12 PS417_04535 lysine transporter LysE no 0.17
    13 PS417_11725 peptidase M19 no 0.17
    14 PS417_07745 hypothetical protein no 0.16
    15 PS417_15855 universal stress protein 0.28 0.16
    16 PS417_08070 nickel ABC transporter permease no 0.16
    17 PS417_03815 DNA transporter 0.40 0.16
    18 PS417_24100 transcriptional regulator PdhR no 0.16
    19 PS417_25090 hypothetical protein no 0.16
    20 PS417_23660 Catechol 1,2-dioxygenase (EC 1.13.11.1) (from data) no 0.16

    Or look for negative cofitness