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  • Top cofit genes for PS417_27385 from Pseudomonas simiae WCS417

    amino acid ABC transporter substrate-binding protein
    SEED: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
    KEGG: polar amino acid transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04015 choline ABC transporter permease no 0.20
    2 PS417_05660 (4Fe-4S)-binding protein no 0.19
    3 PS417_15010 TetR family transcriptional regulator no 0.19
    4 PS417_24590 acyl-CoA dehydrogenase 0.34 0.19
    5 PS417_18965 dienelactone hydrolase no 0.19
    6 PS417_20845 hypothetical protein no 0.18
    7 PS417_08325 acyl-CoA thioesterase 0.26 0.18
    8 PS417_25085 hypothetical protein no 0.18
    9 PS417_13390 GntR family transcriptional regulator no 0.17
    10 PS417_25280 methyltransferase no 0.17
    11 PS417_08940 thioesterase 0.19 0.17
    12 PS417_07390 hypothetical protein no 0.17
    13 PS417_05445 DNA mismatch repair protein MutT no 0.17
    14 PS417_20680 multidrug DMT transporter permease no 0.16
    15 PS417_02680 hypothetical protein 0.28 0.16
    16 PS417_18280 transporter 0.21 0.16
    17 PS417_17490 ABC transporter ATP-binding protein no 0.16
    18 PS417_00145 LysR family transcriptional regulator no 0.16
    19 PS417_23880 glutamyl-Q tRNA(Asp) ligase no 0.16
    20 PS417_04540 long-chain fatty acid--CoA ligase no 0.16

    Or look for negative cofitness