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  • Top cofit genes for GFF5346 from Variovorax sp. SCN45

    Putative outer membrane lipoprotein
    SEED: Putative outer membrane lipoprotein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7269 Altronate dehydratase (EC 4.2.1.7) no 0.55
    2 GFF2591 Virulence factor mviM 0.67 0.54
    3 GFF3368 Pyrimidine permease no 0.52
    4 GFF920 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.52
    5 GFF7051 hypothetical protein no 0.49
    6 GFF2776 hypothetical protein no 0.49
    7 GFF2263 putative membrane protein no 0.47
    8 GFF2487 Two-component system sensor histidine kinase/response regulator hybrid no 0.47
    9 GFF3771 no description no 0.46
    10 GFF2989 hypothetical protein no 0.46
    11 GFF4784 no description no 0.45
    12 GFF5238 General secretion pathway protein L no 0.45
    13 GFF4154 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.45
    14 GFF4385 ParA-like protein no 0.44
    15 GFF2780 Phosphoesterase, PA-phosphatase related no 0.44
    16 GFF887 Small uncharacterized protein Bpro_4170 no 0.44
    17 GFF3754 Fumarylacetoacetate hydrolase family protein no 0.44
    18 GFF2675 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.180) no 0.44
    19 GFF3798 FIG00932573: hypothetical protein no 0.44
    20 GFF1439 putative inositol monophosphatase no 0.43

    Or look for negative cofitness