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  • Top cofit genes for GFF534 from Variovorax sp. SCN45

    Two-component system sensor histidine kinase
    SEED: probable two-component sensor histidine kinase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2790 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.59
    2 GFF5851 TPR repeat no 0.56
    3 GFF3920 FIG00467295: hypothetical protein no 0.55
    4 GFF5287 FIG00455092: hypothetical protein no 0.53
    5 GFF6659 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB (RND type) no 0.53
    6 GFF4237 no description no 0.51
    7 GFF5860 no description no 0.50
    8 GFF1131 putative fatty acid desaturase no 0.50
    9 GFF4731 Assimilatory nitrate reductase large subunit (EC 1.7.99.4) no 0.50
    10 GFF247 ATP-dependent helicase HrpA no 0.49
    11 GFF5862 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.49
    12 GFF2533 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) no 0.48
    13 GFF3931 Protein sirB1 no 0.47
    14 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family no 0.47
    15 GFF6186 no description no 0.47
    16 GFF5288 Uncharacterized protein PA4513 no 0.47
    17 GFF6719 hypothetical protein no 0.46
    18 GFF3059 Transcriptional regulator, LysR family no 0.46
    19 GFF6077 G:T/U mismatch-specific uracil/thymine DNA-glycosylase (EC 3.2.2.27) no 0.46
    20 GFF7159 Putative reductase no 0.45

    Or look for negative cofitness