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  • Top cofit genes for GFF534 from Sphingobium sp. HT1-2

    Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)
    SEED: 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6)
    KEGG: 3-oxoacid CoA-transferase subunit A

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1191 TonB-dependent receptor no 0.91
    2 GFF3465 Excinuclease ABC subunit C no 0.90
    3 GFF5020 Usg protein no 0.90
    4 GFF3604 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.63 0.88
    5 GFF545 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.39) no 0.87
    6 GFF685 TonB-dependent receptor no 0.84
    7 GFF798 ATP-dependent DNA helicase RecQ no 0.83
    8 GFF2436 hypothetical protein no 0.80
    9 GFF4275 Predicted membrane protein (DUF2319) no 0.80
    10 GFF425 hypothetical protein no 0.80
    11 GFF5045 hypothetical protein no 0.80
    12 GFF3533 '3'-to-5' exoribonuclease RNase R' transl_table=11 no 0.79
    13 GFF6 hypothetical protein no 0.79
    14 GFF4075 Two-component system sensor histidine kinase no 0.79
    15 GFF2696 putative membrane protein-putative a lipopolysaccharide biosynthesis acyltransferase no 0.78
    16 GFF1111 hypothetical protein no 0.78
    17 GFF2350 PilT protein-like no 0.78
    18 GFF912 L-carnitine dehydratase/bile acid-inducible protein F no 0.78
    19 GFF1550 ABC transporter, RND-adapter-like protein no 0.78
    20 GFF2032 hypothetical protein no 0.78

    Or look for negative cofitness