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  • Top cofit genes for GFF5329 from Variovorax sp. SCN45

    SAM-dependent methyltransferase
    SEED: SAM-dependent methyltransferases

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2830 Uncharacterized protein CC_3061 no 0.66
    2 GFF5754 Flagellar cap protein FliD no 0.57
    3 GFF259 Bis-ABC ATPase YheS no 0.56
    4 GFF3877 Uncharacterized chaperone protein YegD no 0.56
    5 GFF3936 no description no 0.56
    6 GFF5002 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.55
    7 GFF2521 FIG00931781: hypothetical protein no 0.55
    8 GFF3613 Protein of unknown function DUF55 no 0.54
    9 GFF5271 Transcriptional regulator, LysR family no 0.52
    10 GFF969 ATP-dependent protease HslVU (ClpYQ), peptidase subunit no 0.52
    11 GFF2505 hypothetical protein no 0.52
    12 GFF234 Protein QmcA (possibly involved in integral membrane quality control) no 0.51
    13 GFF5521 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128) no 0.51
    14 GFF421 hypothetical protein no 0.50
    15 GFF531 hypothetical protein no 0.50
    16 GFF2506 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) no 0.50
    17 GFF1463 Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) no 0.50
    18 GFF375 hypothetical protein no 0.49
    19 GFF6289 Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC no 0.49
    20 GFF4934 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.49

    Or look for negative cofitness