Top cofit genes for GFF5322 from Variovorax sp. SCN45

Type IV pilus biogenesis protein PilP
SEED: Type IV pilus biogenesis protein PilP
KEGG: type IV pilus assembly protein PilP

Rank Hit Name Description Conserved? Cofitness  
1 GFF5323 Type IV pilus biogenesis protein PilQ 0.99 0.99
2 GFF5418 Type IV fimbrial biogenesis protein PilY1 no 0.99
3 GFF5490 Uncharacterized protein with LysM domain, COG1652 0.99 0.99
4 GFF5419 Type IV pilus biogenesis protein PilE 0.98 0.99
5 GFF2509 Type IV fimbrial assembly protein PilC 0.99 0.99
6 GFF5319 Type IV pilus biogenesis protein PilM 0.99 0.99
7 GFF5320 Type IV pilus biogenesis protein PilN 0.98 0.99
8 GFF2510 Type IV fimbrial assembly, ATPase PilB 0.99 0.99
9 GFF5321 Type IV pilus biogenesis protein PilO 0.99 0.99
10 GFF5417 hypothetical protein no 0.99
11 GFF993 Type IV pilus biogenesis protein PilF 0.99 0.99
12 GFF5416 Type IV fimbrial biogenesis protein PilW 0.93 0.99
13 GFF5414 hypothetical protein no 0.99
14 GFF33 Type IV pilus biogenesis protein PilZ 0.98 0.99
15 GFF5415 Type IV fimbrial biogenesis protein PilV 0.98 0.99
16 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.98 0.99
17 GFF3826 Response regulator receiver:LytTr DNA-binding region 0.97 0.98
18 GFF3068 FIG00538108: hypothetical protein 0.99 0.98
19 GFF2519 FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 0.99 0.98
20 GFF6075 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 0.99 0.98

Or look for negative cofitness