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  • Top cofit genes for PS417_27225 from Pseudomonas simiae WCS417

    protease
    SEED: Putative stomatin/prohibitin-family membrane protease subunit YbbK

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_13650 LacI family transcriptional regulator no 0.21
    2 PS417_04545 hypothetical protein no 0.20
    3 PS417_21085 GntR family transcriptional regulator no 0.20
    4 PS417_23645 amino acid permease no 0.20
    5 PS417_01370 peptidase M48 no 0.19
    6 PS417_12480 peptidase C39 no 0.19
    7 PS417_05325 fimbrial protein no 0.19
    8 PS417_06995 tRNA-Gly no 0.19
    9 PS417_02015 membrane protein 0.43 0.19
    10 PS417_02355 thiamine biosynthesis protein ThiC 0.40 0.19
    11 PS417_00635 sulfonate ABC transporter ATP-binding protein 0.35 0.19
    12 PS417_02405 hypothetical protein 0.17 0.19
    13 PS417_16950 fimbrial protein no 0.18
    14 PS417_23005 XRE family transcriptional regulator no 0.18
    15 PS417_21535 chemotaxis protein CheY 0.33 0.18
    16 PS417_24895 hypothetical protein no 0.18
    17 PS417_22005 epimerase no 0.18
    18 PS417_20450 hypothetical protein no 0.18
    19 PS417_10605 LuxR family transcriptional regulator no 0.17
    20 PS417_03950 hypothetical protein no 0.17

    Or look for negative cofitness