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  • Top cofit genes for PS417_27220 from Pseudomonas simiae WCS417

    type II secretion system protein E
    SEED: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
    KEGG: general secretion pathway protein E

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_09490 quinone oxidoreductase no 0.20
    2 PS417_07830 transposase no 0.20
    3 PS417_05840 LuxR family transcriptional regulator 0.52 0.19
    4 PS417_13555 ABC transporter permease no 0.17
    5 PS417_14585 MFS transporter 0.35 0.16
    6 PS417_23900 poly(A) polymerase 0.81 0.16
    7 PS417_01565 imidazole glycerol phosphate synthase 0.37 0.15
    8 PS417_07200 LysR family transcriptional regulator no 0.15
    9 PS417_13920 hypothetical protein 0.64 0.15
    10 PS417_19965 histidine kinase no 0.15
    11 PS417_09715 hypothetical protein no 0.15
    12 PS417_19305 acireductone dioxygenase no 0.15
    13 PS417_21750 acetyl-CoA synthetase no 0.15
    14 PS417_01090 hypothetical protein no 0.15
    15 PS417_03665 deoxyribodipyrimidine photolyase no 0.15
    16 PS417_06625 hypothetical protein no 0.15
    17 PS417_13060 chemotaxis protein no 0.15
    18 PS417_11085 ATPase AAA 0.23 0.15
    19 PS417_07995 LOG family protein no 0.15
    20 PS417_15570 excinuclease ABC subunit A 0.27 0.15

    Or look for negative cofitness