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  • Top cofit genes for GFF5304 from Sphingobium sp. HT1-2

    Uncharacterized metal-dependent hydrolase YcfH
    SEED: Putative deoxyribonuclease YcfH
    KEGG: TatD DNase family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3775 hypothetical protein no 0.85
    2 GFF2851 Transcriptional regulator, LysR family no 0.84
    3 GFF1396 hypothetical protein no 0.82
    4 GFF4582 hypothetical protein no 0.78
    5 GFF2215 Two-component system sensor histidine kinase no 0.77
    6 GFF2726 alpha-L-arabinofuranosidase (EC 3.2.1.55) no 0.77
    7 GFF1825 Two-component transcriptional response regulator, NarL/FixJ family 0.47 0.76
    8 GFF3358 Carbon monoxide oxidation accessory protein CoxG no 0.74
    9 GFF133 Biotin synthase (EC 2.8.1.6) 0.57 0.74
    10 GFF2177 hypothetical protein no 0.74
    11 GFF3921 Isochorismatase (EC 3.3.2.1) no 0.73
    12 GFF4601 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.73
    13 GFF4001 Phage protein no 0.73
    14 GFF5306 Aspartyl protease no 0.73
    15 GFF2529 hypothetical protein no 0.73
    16 GFF2962 hypothetical protein no 0.71
    17 GFF5082 Short-chain dehydrodenase (gene dltE) no 0.71
    18 GFF771 TonB-dependent receptor 0.13 0.70
    19 GFF4544 hypothetical protein no 0.70
    20 GFF1361 TonB-dependent receptor no 0.70

    Or look for negative cofitness