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Cofit
Protein
Homologs
Top cofit genes for GFF5303 from
Variovorax sp. SCN45
Tricarboxylate transport transcriptional regulator TctD
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6201
Oxidoreductase, aldo/keto reductase family
no
0.60
2
GFF4376
UPF0380 proteins YafZ and homologs
no
0.52
3
GFF4718
ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.52
4
GFF5381
Transcriptional regulator, LysR family
no
0.50
5
GFF1858
ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.49
6
GFF4906
hypothetical protein
no
0.49
7
GFF1777
Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily
no
0.47
8
GFF2775
Lignostilbene-alpha,beta-dioxygenase and related enzymes
no
0.47
9
GFF4427
hypothetical protein
no
0.47
10
GFF6543
Transcriptional regulator, LysR family
no
0.46
11
GFF326
Polysaccharide deacetylase, caspase activity
no
0.46
12
GFF5132
no description
no
0.46
13
GFF678
Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7)
0.34
0.45
14
GFF6711
ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines)
no
0.44
15
GFF7005
Flagellar biosynthesis protein FlhB
no
0.44
16
GFF2057
23S rRNA (adenine(2030)-N(6))-methyltransferase (EC 2.1.1.266)
no
0.44
17
GFF5434
FIG097052: Sugar transporter
no
0.44
18
GFF3314
FIG00349255: hypothetical protein
no
0.44
19
GFF6546
hypothetical protein
no
0.43
20
GFF2239
no description
no
0.43
Or look for
negative cofitness