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  • Top cofit genes for GFF5300 from Variovorax sp. SCN45

    ABC transporter, permease protein (cluster 10, nitrate/sulfonate/bicarbonate)
    SEED: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
    KEGG: sulfonate/nitrate/taurine transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3615 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.63
    2 GFF4731 Assimilatory nitrate reductase large subunit (EC 1.7.99.4) no 0.60
    3 GFF5515 Lysophospholipase (EC 3.1.1.5) no 0.54
    4 GFF432 Probable transcription regulator protein of MDR efflux pump cluster no 0.53
    5 GFF142 Oxidoreductase no 0.52
    6 GFF4348 hypothetical protein no 0.52
    7 GFF2755 Ribosyl nicotinamide transporter, PnuC-like no 0.50
    8 GFF4801 DedA protein no 0.50
    9 GFF6894 FIG00454405: hypothetical protein no 0.49
    10 GFF5161 Glutathione S-transferase (EC 2.5.1.18) no 0.49
    11 GFF5182 no description no 0.49
    12 GFF1296 putative lipoprotein no 0.48
    13 GFF5656 Formate dehydrogenase O gamma subunit (EC 1.2.1.2) no 0.47
    14 GFF5430 Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB no 0.47
    15 GFF1300 hypothetical protein no 0.47
    16 GFF5269 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) no 0.47
    17 GFF3912 Ferrous iron transport permease EfeU no 0.47
    18 GFF2944 Acetyltransferase no 0.47
    19 GFF2937 Transcriptional regulator, LysR family no 0.47
    20 GFF5271 Transcriptional regulator, LysR family no 0.46

    Or look for negative cofitness