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Cofit
Protein
Homologs
Top cofit genes for GFF53 from
Variovorax sp. SCN45
Polyketide synthase modules and related proteins
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6869
no description
no
0.57
2
GFF3052
Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54)
no
0.53
3
GFF34
Uncharacterized metal-dependent hydrolase YcfH
no
0.53
4
GFF4977
Transcriptional regulator for ferulate or vanillate catabolism
no
0.53
5
GFF2443
Iron-sulfur cluster regulator IscR
no
0.52
6
GFF633
Urea ABC transporter, ATPase protein UrtD
no
0.51
7
GFF1562
Transcriptional regulator, LysR family
no
0.51
8
GFF3842
Uncharacterized protein EC-HemY in Proteobacteria (unrelated to HemY-type PPO in GramPositives)
no
0.50
9
GFF4362
BUG/TctC family periplasmic protein
no
0.49
10
GFF200
Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB
no
0.49
11
GFF2123
Copper metallochaperone PCu(A)C, inserts Cu(I) into cytochrome oxidase subunit II
no
0.48
12
GFF4203
Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative
no
0.48
13
GFF3133
hypothetical protein
no
0.47
14
GFF5369
Large-conductance mechanosensitive channel
no
0.46
15
GFF4508
no description
no
0.46
16
GFF316
Transmembrane protein
no
0.46
17
GFF2285
Transcriptional regulator, RpiR family
no
0.45
18
GFF7179
Xaa-Pro aminopeptidase (EC 3.4.11.9)
no
0.44
19
GFF3653
Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9)
no
0.44
20
GFF5188
no description
no
0.44
Or look for
negative cofitness