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  • Top cofit genes for GFF53 from Variovorax sp. SCN45

    Polyketide synthase modules and related proteins

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6869 no description no 0.57
    2 GFF3052 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) no 0.53
    3 GFF34 Uncharacterized metal-dependent hydrolase YcfH no 0.53
    4 GFF4977 Transcriptional regulator for ferulate or vanillate catabolism no 0.53
    5 GFF2443 Iron-sulfur cluster regulator IscR no 0.52
    6 GFF633 Urea ABC transporter, ATPase protein UrtD no 0.51
    7 GFF1562 Transcriptional regulator, LysR family no 0.51
    8 GFF3842 Uncharacterized protein EC-HemY in Proteobacteria (unrelated to HemY-type PPO in GramPositives) no 0.50
    9 GFF4362 BUG/TctC family periplasmic protein no 0.49
    10 GFF200 Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB no 0.49
    11 GFF2123 Copper metallochaperone PCu(A)C, inserts Cu(I) into cytochrome oxidase subunit II no 0.48
    12 GFF4203 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative no 0.48
    13 GFF3133 hypothetical protein no 0.47
    14 GFF5369 Large-conductance mechanosensitive channel no 0.46
    15 GFF4508 no description no 0.46
    16 GFF316 Transmembrane protein no 0.46
    17 GFF2285 Transcriptional regulator, RpiR family no 0.45
    18 GFF7179 Xaa-Pro aminopeptidase (EC 3.4.11.9) no 0.44
    19 GFF3653 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) no 0.44
    20 GFF5188 no description no 0.44

    Or look for negative cofitness