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Cofit
Protein
Homologs
Top cofit genes for GFF5293 from
Sphingobium sp. HT1-2
Mobile element protein
SEED: Mobile element protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF3462
Transcriptional regulator, LysR family
no
0.88
2
GFF636
hypothetical protein
no
0.87
3
GFF4106
PDZ domain family protein
no
0.84
4
GFF4046
anti-FecI sigma factor FecR
no
0.83
5
GFF819
RNA binding S1 domain protein
no
0.83
6
GFF2595
hypothetical protein
no
0.83
7
GFF2596
hypothetical protein
no
0.83
8
GFF4142
Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)
no
0.82
9
GFF4115
DNA-3-methyladenine glycosylase (EC 3.2.2.20)
no
0.81
10
GFF2791
Two-component system sensor histidine kinase
no
0.80
11
GFF2272
hypothetical protein
no
0.80
12
GFF2286
ATP-dependent Clp protease ATP-binding subunit ClpA
no
0.79
13
GFF366
NADH:ubiquinone oxidoreductase 17.2 kD subunit
no
0.79
14
GFF785
Ammonium transporter
no
0.78
15
GFF2558
Peptidase, M23/M37 family
no
0.78
16
GFF1149
Nitrogen regulation protein NtrB (EC 2.7.13.3)
no
0.78
17
GFF3048
Two-component nitrogen fixation transcriptional regulator FixJ
no
0.78
18
GFF776
RNA polymerase sigma-54 factor RpoN
no
0.78
19
GFF4047
RNA polymerase ECF-type sigma factor
no
0.78
20
GFF4190
[Protein-PII] uridylyltransferase (EC 2.7.7.59) / [Protein-PII]-UMP uridylyl-removing enzyme
no
0.77
Or look for
negative cofitness