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Cofit
Protein
Homologs
Top cofit genes for GFF5288 from
Variovorax sp. SCN45
Uncharacterized protein PA4513
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5341
Efflux ABC transporter, permease protein
no
0.69
2
GFF6324
Kup system potassium uptake protein
0.30
0.64
3
GFF6077
G:T/U mismatch-specific uracil/thymine DNA-glycosylase (EC 3.2.2.27)
no
0.61
4
GFF5263
Ferric iron ABC transporter, permease protein
no
0.59
5
GFF1194
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-)
no
0.58
6
GFF3048
Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4)
no
0.57
7
GFF5052
FAD-dependent oxidoreductase SPO0682
no
0.56
8
GFF6884
FIG00932717: hypothetical protein
no
0.56
9
GFF256
Twitching motility protein PilT
no
0.56
10
GFF5035
Opine oxidase subunit A
0.46
0.56
11
GFF5154
DNA-binding transcriptional regulator, MocR family / aminotransferase domain
no
0.56
12
GFF4888
Mlr6156 protein
no
0.56
13
GFF3917
Ferrous iron transporter FeoB
no
0.55
14
GFF2163
hypothetical protein
no
0.55
15
GFF6816
SAM-dependent methyltransferase
no
0.54
16
GFF2152
twitching motility protein PilH
no
0.54
17
GFF1862
Adenosine deaminase (EC 3.5.4.4)
0.22
0.54
18
GFF3931
Protein sirB1
no
0.54
19
GFF531
hypothetical protein
no
0.54
20
GFF5855
T1SS secreted agglutinin RTX
no
0.53
Or look for
negative cofitness