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  • Top cofit genes for GFF5288 from Variovorax sp. SCN45

    Uncharacterized protein PA4513

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5341 Efflux ABC transporter, permease protein no 0.69
    2 GFF6324 Kup system potassium uptake protein 0.30 0.64
    3 GFF6077 G:T/U mismatch-specific uracil/thymine DNA-glycosylase (EC 3.2.2.27) no 0.61
    4 GFF5263 Ferric iron ABC transporter, permease protein no 0.59
    5 GFF1194 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-) no 0.58
    6 GFF3048 Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) no 0.57
    7 GFF5052 FAD-dependent oxidoreductase SPO0682 no 0.56
    8 GFF6884 FIG00932717: hypothetical protein no 0.56
    9 GFF256 Twitching motility protein PilT no 0.56
    10 GFF5035 Opine oxidase subunit A 0.46 0.56
    11 GFF5154 DNA-binding transcriptional regulator, MocR family / aminotransferase domain no 0.56
    12 GFF4888 Mlr6156 protein no 0.56
    13 GFF3917 Ferrous iron transporter FeoB no 0.55
    14 GFF2163 hypothetical protein no 0.55
    15 GFF6816 SAM-dependent methyltransferase no 0.54
    16 GFF2152 twitching motility protein PilH no 0.54
    17 GFF1862 Adenosine deaminase (EC 3.5.4.4) 0.22 0.54
    18 GFF3931 Protein sirB1 no 0.54
    19 GFF531 hypothetical protein no 0.54
    20 GFF5855 T1SS secreted agglutinin RTX no 0.53

    Or look for negative cofitness