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  • Top cofit genes for PS417_27025 from Pseudomonas simiae WCS417

    DNA-binding protein
    SEED: Outer membrane protein assembly factor YaeT precursor

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_22780 XRE family transcriptional regulator 0.12 0.49
    2 PS417_14065 UTP--glucose-1-phosphate uridylyltransferase no 0.45
    3 PS417_13795 UDP-4-amino-4-deoxy-L-arabinose formyltransferase no 0.42
    4 PS417_13790 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase no 0.41
    5 PS417_25645 peptidase M23 0.63 0.40
    6 PS417_16990 acyl-CoA dehydrogenase 0.74 0.39
    7 PS417_13800 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase no 0.39
    8 PS417_22850 virulence factor family protein 0.32 0.39
    9 PS417_22775 histidine kinase no 0.39
    10 PS417_13805 4-amino-4-deoxy-L-arabinose transferase no 0.38
    11 PS417_13820 UDP-glucose 6-dehydrogenase no 0.38
    12 PS417_01795 glucosyltransferase MdoH no 0.38
    13 PS417_26225 electron transfer flavoprotein subunit beta no 0.38
    14 PS417_15380 hypothetical protein 0.13 0.37
    15 PS417_16510 Clp protease ClpX no 0.37
    16 PS417_04275 hypothetical protein 0.40 0.37
    17 PS417_26235 (Fe-S)-binding protein no 0.36
    18 PS417_00335 cytochrome B561 no 0.36
    19 PS417_25790 aminoglycoside phosphotransferase 0.71 0.36
    20 PS417_12205 hypothetical protein no 0.35

    Or look for negative cofitness