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  • Top cofit genes for GFF5275 from Variovorax sp. SCN45

    Various polyols ABC transporter, ATP-binding protein
    SEED: Various polyols ABC transporter, ATP-binding component
    KEGG: sorbitol/mannitol transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3338 Threonine efflux protein no 0.54
    2 GFF3210 hypothetical protein no 0.53
    3 GFF2220 Aldehyde dehydrogenase (EC 1.2.1.3) 0.48 0.50
    4 GFF2032 Excinuclease ABC subunit A, dimeric form no 0.49
    5 GFF2204 no description no 0.49
    6 GFF5087 DNA repair protein RadA 0.48 0.48
    7 GFF3120 no description no 0.48
    8 GFF2091 Cobalt/zinc/cadmium resistance protein CzcD no 0.47
    9 GFF3960 3'-to-5' oligoribonuclease (orn) no 0.47
    10 GFF6377 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) 0.32 0.47
    11 GFF2113 NADH dehydrogenase (EC 1.6.99.3) no 0.46
    12 GFF2546 sodium-solute symporter, putative no 0.46
    13 GFF4094 no description no 0.46
    14 GFF1094 Phosphate ABC transporter, permease protein PstA (TC 3.A.1.7.1) 0.61 0.45
    15 GFF4212 Methionine gamma-lyase (EC 4.4.1.11) no 0.44
    16 GFF990 LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) no 0.44
    17 GFF2616 no description no 0.44
    18 GFF1962 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) no 0.44
    19 GFF6397 LysR family transcriptional regulator PA2758 0.62 0.44
    20 GFF5820 hypothetical protein no 0.44

    Or look for negative cofitness