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  • Top cofit genes for PS417_27005 from Pseudomonas simiae WCS417

    membrane protein
    SEED: Predicted integral membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_00900 4-aminobutyrate aminotransferase no 0.25
    2 PS417_26005 biotin synthase 0.20 0.22
    3 PS417_10925 malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) (from data) no 0.21
    4 PS417_05595 ornithine carbamoyltransferase 0.29 0.21
    5 PS417_11475 membrane protein no 0.21
    6 PS417_26000 8-amino-7-oxononanoate synthase 0.12 0.21
    7 PS417_18600 isopropylmalate isomerase 0.51 0.20
    8 PS417_23805 acetolactate synthase 3 regulatory subunit 0.41 0.19
    9 PS417_21705 arginine N-succinyltransferase 0.44 0.19
    10 PS417_23800 ketol-acid reductoisomerase 0.45 0.19
    11 PS417_26740 homoserine acetyltransferase 0.47 0.19
    12 PS417_26890 dihydroxy-acid dehydratase 0.47 0.19
    13 PS417_15460 GntR family transcriptional regulator no 0.19
    14 PS417_06060 phosphoenolpyruvate carboxylase no 0.18
    15 PS417_18595 3-isopropylmalate dehydratase 0.50 0.18
    16 PS417_04685 histidine kinase no 0.18
    17 PS417_27305 5-formyltetrahydrofolate cyclo-ligase no 0.18
    18 PS417_26745 methionine biosynthesis protein MetW 0.45 0.18
    19 PS417_18585 3-isopropylmalate dehydrogenase 0.54 0.17
    20 PS417_17565 branched-chain amino acid aminotransferase no 0.17

    Or look for negative cofitness