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  • Top cofit genes for GFF5271 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Chromosome initiation inhibitor

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4853 Transcriptional regulator, LysR family no 0.63
    2 GFF3317 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) no 0.57
    3 GFF4902 hypothetical protein no 0.57
    4 GFF3912 Ferrous iron transport permease EfeU no 0.56
    5 GFF4262 hypothetical protein no 0.55
    6 GFF5754 Flagellar cap protein FliD no 0.55
    7 GFF2830 Uncharacterized protein CC_3061 no 0.55
    8 GFF5002 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.53
    9 GFF7106 BUG/TctC family periplasmic protein no 0.53
    10 GFF5403 no description no 0.53
    11 GFF6747 Glycosyl transferase, family 2 no 0.53
    12 GFF1839 Integral membrane protein no 0.53
    13 GFF6486 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) no 0.52
    14 GFF1336 ABC transporter, substrate-binding protein RSc1750 no 0.52
    15 GFF5329 SAM-dependent methyltransferase no 0.52
    16 GFF1853 no description no 0.51
    17 GFF7310 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA no 0.50
    18 GFF3827 UPF0118 membrane protein SMc00793 no 0.50
    19 GFF6499 hypothetical protein no 0.50
    20 GFF6175 hypothetical protein no 0.50

    Or look for negative cofitness