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  • Top cofit genes for GFF5270 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4783 Penicillin acylase (EC 3.5.1.11) no 0.73
    2 GFF1384 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) no 0.61
    3 GFF2682 Protein containing domains DUF403 0.22 0.58
    4 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.58
    5 GFF6860 Epoxide hydrolase (EC 3.3.2.9) no 0.57
    6 GFF2021 FIG00538369: hypothetical protein no 0.57
    7 GFF4993 putative tetratricopeptide repeat family protein no 0.57
    8 GFF6800 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.57
    9 GFF6026 no description no 0.57
    10 GFF3923 Kynurenine formamidase, bacterial (EC 3.5.1.9) no 0.57
    11 GFF4582 TRAP-type C4-dicarboxylate transport system, small permease component no 0.56
    12 GFF2683 Protein containing domains DUF404, DUF407 no 0.56
    13 GFF3875 beta-N-acetylglucosaminidase (EC 3.2.1.52) no 0.56
    14 GFF1268 FIG022199: FAD-binding protein no 0.56
    15 GFF5684 3-ketoacyl-CoA thiolase (EC 2.3.1.16) no 0.55
    16 GFF7322 hypothetical protein no 0.55
    17 GFF3443 hypothetical protein no 0.54
    18 GFF3582 Tripartite tricarboxylate transporter TctC family no 0.53
    19 GFF5999 DNA polymerase IV (EC 2.7.7.7) no 0.53
    20 GFF5410 Adenylate cyclase (EC 4.6.1.1) no 0.53

    Or look for negative cofitness