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  • Top cofit genes for GFF5257 from Variovorax sp. SCN45

    ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines)
    SEED: Putative glutathione transporter, ATP-binding component
    KEGG: peptide/nickel transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF194 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.38 0.53
    2 GFF4998 L-carnitine dehydratase/bile acid-inducible protein F no 0.50
    3 GFF676 Aminoglycoside 9-phosphotransferase (EC 2.7.1.-) => APH(9)-I no 0.49
    4 GFF696 Glycosyl transferase, group 2 family no 0.49
    5 GFF5848 Flagellar motor protein no 0.49
    6 GFF100 no description no 0.48
    7 GFF5761 Flagellar motor rotation protein MotA no 0.47
    8 GFF6353 T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain no 0.47
    9 GFF4564 hypothetical protein no 0.45
    10 GFF4375 FIG00463055: hypothetical protein no 0.44
    11 GFF6516 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) no 0.44
    12 GFF6856 DipZ protein no 0.44
    13 GFF1804 Uncharacterized UPF0118 membrane protein no 0.43
    14 GFF5845 NAD synthetase (EC 6.3.1.5) no 0.43
    15 GFF63 Putative glycosyltransferase no 0.42
    16 GFF1613 Phosphonate ABC transporter permease protein PhnE (TC 3.A.1.9.1) no 0.42
    17 GFF6557 hypothetical protein no 0.42
    18 GFF1349 Thioesterase no 0.42
    19 GFF5269 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) no 0.42
    20 GFF6908 putative membrane protein no 0.41

    Or look for negative cofitness