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  • Top cofit genes for PS417_26880 from Pseudomonas simiae WCS417

    SAM-dependent methyltransferase
    SEED: LSU m5C1962 methyltransferase RlmI
    KEGG: ribosomal RNA large subunit methyltransferase I

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04290 hypothetical protein 0.64 0.38
    2 PS417_24500 DEAD/DEAH box helicase 0.47 0.37
    3 PS417_21630 magnesium transporter no 0.34
    4 PS417_26370 RNA helicase 0.20 0.34
    5 PS417_08135 3-phosphoshikimate 1-carboxyvinyltransferase no 0.33
    6 PS417_22565 formyltetrahydrofolate deformylase 0.43 0.30
    7 PS417_19955 hypothetical protein 0.24 0.28
    8 PS417_20650 hypothetical protein no 0.28
    9 PS417_24335 50S rRNA methyltransferase 0.62 0.27
    10 PS417_19835 flagellar biosynthesis protein FliS 0.69 0.27
    11 PS417_17125 transcriptional regulator 0.31 0.27
    12 PS417_15820 universal stress protein UspA no 0.27
    13 PS417_20930 50S rRNA methyltransferase 0.71 0.27
    14 PS417_08190 membrane protein 0.33 0.27
    15 PS417_03260 5S ribosomal RNA no 0.27
    16 PS417_08245 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase no 0.26
    17 PS417_19830 flagellar assembly protein FliT 0.59 0.26
    18 PS417_27425 exopolyphosphatase 0.42 0.26
    19 PS417_01640 histidine kinase no 0.26
    20 PS417_26760 oxidase 0.26 0.25

    Or look for negative cofitness