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  • Top cofit genes for PS417_26870 from Pseudomonas simiae WCS417

    5-hydroxymethyluracil DNA glycosylase
    SEED: Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)
    KEGG: formamidopyrimidine-DNA glycosylase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_06280 ribonuclease HII 0.66 0.25
    2 PS417_28200 hypothetical protein no 0.20
    3 PS417_21015 EstX protein no 0.19
    4 PS417_20570 3-oxoacyl-ACP synthase no 0.19
    5 PS417_15055 C4-dicarboxylate ABC transporter 0.30 0.18
    6 PS417_01495 amino acid ABC transporter 0.59 0.18
    7 PS417_10275 histidine kinase no 0.18
    8 PS417_22855 ssDNA exonuclease RecJ 0.69 0.17
    9 PS417_27240 hypothetical protein no 0.17
    10 PS417_10925 malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) (from data) 0.32 0.17
    11 PS417_13625 cytochrome B561 no 0.17
    12 PS417_23910 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.78 0.17
    13 PS417_20715 cytochrome Cbb3 0.29 0.17
    14 PS417_08545 aromatic ring-opening dioxygenase LigB 0.73 0.16
    15 PS417_18060 general secretion pathway protein GspJ no 0.16
    16 PS417_01500 amino acid transporter 0.33 0.16
    17 PS417_10635 peptidylprolyl isomerase 0.63 0.16
    18 PS417_13340 hypothetical protein no 0.16
    19 PS417_24375 hypothetical protein no 0.16
    20 PS417_19070 hypothetical protein no 0.16

    Or look for negative cofitness