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  • Top cofit genes for PS417_02670 from Pseudomonas simiae WCS417

    ABC transporter
    SEED: Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_02665 branched-chain amino acid ABC transporter permease 0.93 0.56
    2 PS417_02660 branched-chain amino acid transporter permease subunit LivH 0.92 0.55
    3 PS417_02655 amino acid ABC transporter substrate-binding protein 0.93 0.49
    4 PS417_10965 chemotaxis protein 0.51 0.44
    5 PS417_01990 cell division protein no 0.43
    6 PS417_02675 ABC transporter ATP-binding protein 0.87 0.42
    7 PS417_22555 chemotaxis protein no 0.40
    8 PS417_18705 succinate dehydrogenase no 0.37
    9 PS417_18540 colicin V production CvpA no 0.37
    10 PS417_06625 hypothetical protein no 0.36
    11 PS417_07095 histidine kinase no 0.36
    12 PS417_00160 2-dehydro-3-deoxy-6-phosphogalactonate aldolase no 0.36
    13 PS417_22410 hypothetical protein no 0.36
    14 PS417_19685 protein phosphatase 0.24 0.35
    15 PS417_22775 histidine kinase 0.38 0.35
    16 PS417_04910 amino acid ABC transporter permease 0.80 0.35
    17 PS417_09695 hydrolase 0.20 0.35
    18 PS417_19620 hypothetical protein no 0.35
    19 PS417_19830 flagellar assembly protein FliT no 0.34
    20 PS417_27275 hypothetical protein no 0.33

    Or look for negative cofitness