Top cofit genes for GFF5228 from Hydrogenophaga sp. GW460-11-11-14-LB1

Transcriptional regulator, TetR family

Rank Hit Name Description Conserved? Cofitness  
1 GFF2923 Cytochrome c-type biogenesis protein ResA 0.67 0.87
2 GFF1204 Regulatory protein of benzoate catabolism 0.25 0.82
3 GFF4892 Probable two-component transmembrane sensor histidine kinase transcription regulator protein (EC 2.7.3.-) 0.57 0.80
4 GFF2715 rRNA small subunit methyltransferase I 0.64 0.78
5 GFF829 DNA repair protein RecN no 0.78
6 GFF3061 FIG00931323: hypothetical protein no 0.77
7 GFF3062 Chromosome initiation inhibitor no 0.77
8 GFF2986 Transcriptional regulator, GntR family no 0.76
9 GFF1011 Transcriptional regulator, IclR family no 0.76
10 GFF2575 Branched-chain amino acid transport protein AzlC no 0.75
11 GFF2931 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) 0.19 0.74
12 GFF3339 RNA polymerase sigma factor RpoE no 0.73
13 GFF721 Similar to eukaryotic Peptidyl prolyl 4-hydroxylase, alpha subunit (EC 1.14.11.2) no 0.72
14 GFF2583 Ferric iron ABC transporter, permease protein no 0.72
15 GFF1758 periplasmic sensor signal transduction histidine kinase 0.19 0.72
16 GFF2780 Pyruvate kinase (EC 2.7.1.40) 0.48 0.72
17 GFF1757 response regulator in two-component regulatory system with PhoQ 0.36 0.71
18 GFF1973 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) no 0.71
19 GFF4893 Nitrogen regulation protein NR(I) no 0.71
20 GFF5050 TPR repeat no 0.71

Or look for negative cofitness