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  • Top cofit genes for GFF5221 from Variovorax sp. SCN45

    Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)
    SEED: Phosphonoacetaldehyde hydrolase (EC 3.11.1.1)
    KEGG: phosphonoacetaldehyde hydrolase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7009 hypothetical protein no 0.62
    2 GFF1326 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) no 0.61
    3 GFF6928 Putative transmembrane protein no 0.60
    4 GFF2229 Pca regulon regulatory protein PcaR no 0.59
    5 GFF3943 Poly(A) polymerase (EC 2.7.7.19) no 0.56
    6 GFF4287 Acyl-CoA dehydrogenase no 0.56
    7 GFF2239 no description no 0.55
    8 GFF1653 Transcriptional regulator, AcrR family no 0.55
    9 GFF3174 Oxidoreductase, GMC family no 0.55
    10 GFF4508 no description no 0.55
    11 GFF5475 Uncharacterized MFS-type transporter no 0.54
    12 GFF4445 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase (EC 6.3.2.-) 0.37 0.54
    13 GFF706 hypothetical protein no 0.53
    14 GFF7363 hypothetical protein no 0.53
    15 GFF2178 Methyl-accepting chemotaxis sensor/transducer protein no 0.53
    16 GFF428 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.52
    17 GFF6772 L-arabonate dehydratase (EC 4.2.1.25) no 0.52
    18 GFF4490 Site-specific tyrosine recombinase XerC no 0.52
    19 GFF1113 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) 0.42 0.52
    20 GFF118 putative membrane protein no 0.52

    Or look for negative cofitness