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  • Top cofit genes for GFF5209 from Variovorax sp. SCN45

    DUF1854 domain-containing protein
    SEED: DUF1854 domain-containing protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3621 Magnesium and cobalt transport protein CorA no 0.67
    2 GFF5208 Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 0.97 0.65
    3 GFF4511 Transcriptional regulator, LysR family no 0.64
    4 GFF3624 Putative transmembrane protein no 0.60
    5 GFF371 RNA-binding protein YhbY no 0.59
    6 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) no 0.57
    7 GFF3617 Dienelactone hydrolase family protein no 0.54
    8 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) no 0.54
    9 GFF3535 Aquaporin Z no 0.51
    10 GFF3616 2-hydroxychromene-2-carboxylate isomerase family protein no 0.51
    11 GFF2734 DNA topoisomerase IV subunit B (EC 5.99.1.3) no 0.51
    12 GFF2437 hypothetical protein no 0.50
    13 GFF649 no description no 0.50
    14 GFF3619 no description no 0.50
    15 GFF3503 Subclass B3 beta-lactamase (EC 3.5.2.6) no 0.50
    16 GFF4129 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.50
    17 GFF5080 DNA recombination-dependent growth factor RdgC no 0.49
    18 GFF2563 Two-component system sensor histidine kinase no 0.48
    19 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) no 0.48
    20 GFF2730 DNA topoisomerase IV subunit A (EC 5.99.1.3) no 0.48

    Or look for negative cofitness