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  • Top cofit genes for GFF5201 from Variovorax sp. SCN45

    L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43)
    SEED: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43)
    KEGG: dihydrodipicolinate synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6839 hypothetical protein no 0.58
    2 GFF4131 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.55
    3 GFF1016 no description no 0.54
    4 GFF2876 no description no 0.53
    5 GFF2745 FIG074102: hypothetical protein no 0.53
    6 GFF2382 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.66) 0.25 0.53
    7 GFF3027 T6SS component TssK (ImpJ/VasE) no 0.53
    8 GFF7391 hypothetical protein no 0.53
    9 GFF4665 no description no 0.51
    10 GFF1711 DUF3701 domain / Site-specific tyrosine recombinase no 0.51
    11 GFF3240 hypothetical protein no 0.49
    12 GFF5814 Rhodanese-related sulfurtransferase no 0.48
    13 GFF2495 Ornithine cyclodeaminase (EC 4.3.1.12) no 0.48
    14 GFF4334 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.48
    15 GFF4800 DNA mismatch repair protein MutL no 0.47
    16 GFF4223 BUG/TctC family periplasmic protein no 0.47
    17 GFF6056 Transcriptional regulator, LacI family no 0.47
    18 GFF1489 Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like no 0.47
    19 GFF4227 Thiamine pyrophosphate-requiring enzymes no 0.47
    20 GFF3963 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) no 0.47

    Or look for negative cofitness