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  • Top cofit genes for GFF520 from Variovorax sp. SCN45

    Efflux transport system, outer membrane factor (OMF) lipoprotein
    SEED: RND efflux system, outer membrane lipoprotein, NodT family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4801 DedA protein 0.57 0.63
    2 GFF7215 Transcriptional regulator, LysR family no 0.61
    3 GFF3955 Histidinol-phosphate aminotransferase (EC 2.6.1.9) 0.26 0.59
    4 GFF3665 no description no 0.56
    5 GFF4396 Mobile element protein no 0.54
    6 GFF4380 Transcriptional regulator, Xre family no 0.52
    7 GFF2516 hypothetical protein no 0.51
    8 GFF4244 Acid phosphatase (EC 3.1.3.2) no 0.51
    9 GFF1882 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase, beta subunit (EC 1.2.7.-) no 0.51
    10 GFF2649 putative autotransporter protein no 0.50
    11 GFF6049 Acyl-CoA dehydrogenase family protein no 0.50
    12 GFF6156 Aerobic carbon monoxide dehydrogenase (quinone), medium chain (EC 1.2.5.3) no 0.50
    13 GFF809 Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.50
    14 GFF5268 protein of unknown function DUF805 no 0.50
    15 GFF5192 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) no 0.50
    16 GFF4351 Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) no 0.50
    17 GFF6794 hypothetical protein no 0.49
    18 GFF5455 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) no 0.49
    19 GFF282 hypothetical protein no 0.48
    20 GFF3906 Acyl-CoA dehydrogenase no 0.48

    Or look for negative cofitness