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  • Top cofit genes for GFF5196 from Variovorax sp. SCN45

    L-arabinose ABC transporter, permease protein AraH
    SEED: L-arabinose transport system permease protein (TC 3.A.1.2.2)
    KEGG: putative multiple sugar transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2363 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC 4.1.2.52) no 0.65
    2 GFF3772 Arginase (EC 3.5.3.1) 0.27 0.58
    3 GFF3175 Uncharacterized MFS-type transporter 0.24 0.56
    4 GFF6706 ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92) no 0.54
    5 GFF4039 Heavy metal RND efflux outer membrane protein, CzcC family no 0.53
    6 GFF2492 BUG/TctC family periplasmic protein no 0.53
    7 GFF3156 FIG00441737: hypothetical protein no 0.52
    8 GFF1689 BUG/TctC family periplasmic protein no 0.52
    9 GFF6604 FIG00457034: hypothetical protein no 0.51
    10 GFF5729 Methyl-accepting chemotaxis sensor/transducer protein no 0.51
    11 GFF7251 Mobile element protein no 0.51
    12 GFF1918 hypothetical protein no 0.51
    13 GFF6983 FIG140336: TPR domain protein no 0.51
    14 GFF6950 Acetoacetyl-CoA reductase (EC 1.1.1.36) no 0.51
    15 GFF790 hypothetical protein no 0.51
    16 GFF5139 no description no 0.50
    17 GFF4084 hypothetical protein no 0.50
    18 GFF2353 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.27 0.49
    19 GFF5081 Amidohydrolase family protein 0.34 0.49
    20 GFF6831 hypothetical protein no 0.49

    Or look for negative cofitness