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  • Top cofit genes for GFF5190 from Variovorax sp. SCN45

    L-arabinose 1-dehydrogenase (EC 1.1.1.376)
    SEED: Putative oxidoreductase in arabinose utilization cluster

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF397 NAD(P)H-hydrate epimerase (EC 5.1.99.6) / ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136) no 0.56
    2 GFF6438 hypothetical protein no 0.51
    3 GFF681 Hypothetical protein in cluster with At3g50560-like gene family no 0.50
    4 GFF4815 Glucose-fructose oxidoreductase (EC 1.1.99.28) no 0.49
    5 GFF7111 hypothetical protein no 0.48
    6 GFF5872 Inner membrane protein YbhQ no 0.48
    7 GFF1564 Prevent host death protein, Phd antitoxin no 0.48
    8 GFF2559 hypothetical protein no 0.46
    9 GFF620 Transcriptional regulator, LysR family no 0.45
    10 GFF2550 Dihydroneopterin triphosphate pyrophosphohydrolase type 2 no 0.45
    11 GFF6052 HNH endonuclease family protein no 0.44
    12 GFF6146 Phosphonoacetate hydrolase (EC 3.11.1.2) no 0.44
    13 GFF1124 no description no 0.43
    14 GFF4020 Arsenic resistance protein ArsH no 0.43
    15 GFF306 FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase no 0.43
    16 GFF6458 Lipid A 4'-phosphatase LpxF-like, putative no 0.43
    17 GFF1493 BUG/TctC family periplasmic protein no 0.43
    18 GFF3454 Cys regulon transcriptional activator CysB no 0.43
    19 GFF1965 Magnesium and cobalt efflux protein CorC no 0.43
    20 GFF1599 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) no 0.43

    Or look for negative cofitness