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  • Top cofit genes for GFF519 from Variovorax sp. SCN45

    Transcriptional regulator, AcrR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2745 FIG074102: hypothetical protein no 0.56
    2 GFF3052 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) no 0.52
    3 GFF7113 hypothetical protein no 0.52
    4 GFF720 no description no 0.50
    5 GFF6302 Transcriptional regulator, IclR family no 0.49
    6 GFF1490 Transcriptional regulator, LysR family no 0.49
    7 GFF6684 ABC transporter, ATP-binding protein no 0.49
    8 GFF44 hypothetical protein no 0.48
    9 GFF1860 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.47
    10 GFF3397 Benzoate ABC transporter, substrate-binding protein no 0.47
    11 GFF5024 hypothetical protein no 0.47
    12 GFF1023 UPF0311 protein RPA1785 no 0.46
    13 GFF5750 Flagellar M-ring protein FliF no 0.46
    14 GFF2374 Transcription elongation factor GreB no 0.45
    15 GFF1390 ortholog of Bordetella pertussis (BX470248) BP2750 no 0.45
    16 GFF4182 Extracytoplasmic function (ECF) sigma factor VreI no 0.45
    17 GFF6093 1,2-phenylacetyl-CoA epoxidase, subunit A (EC 1.14.13.149) no 0.45
    18 GFF3061 BUG/TctC family periplasmic protein no 0.45
    19 GFF7230 Threonine dehydrogenase and related Zn-dependent dehydrogenases no 0.45
    20 GFF3422 Lipoprotein-related protein no 0.45

    Or look for negative cofitness