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  • Top cofit genes for PS417_26575 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Malonate utilization transcriptional regulator
    KEGG: LysR family transcriptional regulator, malonate utilization transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_19380 glutathione S-transferase no 0.22
    2 PS417_13195 RND transporter MFP subunit no 0.21
    3 PS417_27325 multidrug ABC transporter ATP-binding protein no 0.21
    4 PS417_14205 hypothetical protein no 0.21
    5 PS417_03085 type II secretion system protein F no 0.20
    6 PS417_16960 fimbrial protein no 0.20
    7 PS417_27145 TetR family transcriptional regulator no 0.20
    8 PS417_03075 hypothetical protein no 0.19
    9 PS417_24230 ATP-dependent protease no 0.19
    10 PS417_00180 tryptophan synthase subunit alpha no 0.19
    11 PS417_12560 MFS transporter 0.17 0.19
    12 PS417_14035 lactoylglutathione lyase 0.58 0.19
    13 PS417_10580 glutamine synthetase no 0.18
    14 PS417_09445 antibiotic biosynthesis monooxygenase no 0.18
    15 PS417_21895 nuclease PIN no 0.18
    16 PS417_18420 deoxyribonuclease no 0.18
    17 PS417_14725 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) no 0.18
    18 PS417_28220 LysR family transcriptional regulator no 0.18
    19 PS417_20180 agmatinase no 0.17
    20 PS417_24790 hypothetical protein no 0.17

    Or look for negative cofitness