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  • Top cofit genes for PS417_26565 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_22555 chemotaxis protein no 0.26
    2 PS417_02440 flagellar motor protein MotB 0.21 0.25
    3 PS417_22000 glutathione S-transferase no 0.24
    4 PS417_06970 LysR family transcriptional regulator no 0.23
    5 PS417_04650 D-alanine--D-alanine ligase no 0.23
    6 PS417_16070 TonB-dependent receptor no 0.22
    7 PS417_20415 reverse transcriptase no 0.21
    8 PS417_13425 cupin 0.29 0.21
    9 PS417_06460 TonB-dependent receptor no 0.21
    10 PS417_06365 RNA polymerase sigma factor 0.53 0.21
    11 PS417_02435 flagellar motor protein MotA no 0.21
    12 PS417_07200 LysR family transcriptional regulator no 0.21
    13 PS417_17045 hypothetical protein no 0.21
    14 PS417_12825 MFS transporter no 0.20
    15 PS417_28110 transglycosylase 0.38 0.20
    16 PS417_10445 LysR family transcriptional regulator 0.19 0.20
    17 PS417_17515 GfdT protein 0.60 0.20
    18 PS417_11040 aldose epimerase no 0.20
    19 PS417_03070 LuxR family transcriptional regulator no 0.20
    20 PS417_07020 chemotaxis protein 0.10 0.20

    Or look for negative cofitness