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  • Top cofit genes for GFF5187 from Variovorax sp. SCN45

    Aldose 1-epimerase (EC 5.1.3.3)
    SEED: Aldose 1-epimerase (EC 5.1.3.3)
    KEGG: aldose 1-epimerase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF870 TonB-dependent receptor no 0.50
    2 GFF1051 no description no 0.48
    3 GFF6764 Transcriptional regulator, MarR family no 0.48
    4 GFF3551 MoxR-like ATPases 0.34 0.47
    5 GFF1320 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.45
    6 GFF2180 hypothetical protein no 0.45
    7 GFF2448 Acyl-CoA dehydrogenase no 0.45
    8 GFF1330 UPF0061 protein YdiU 0.23 0.44
    9 GFF1918 hypothetical protein no 0.44
    10 GFF6969 hypothetical protein no 0.43
    11 GFF1237 Methionine sulfoxide reductase cytochrome b subunit no 0.43
    12 GFF2484 Urease beta subunit (EC 3.5.1.5) no 0.43
    13 GFF267 no description no 0.43
    14 GFF6903 Transcriptional regulator, LysR family no 0.43
    15 GFF2558 DNA protection during starvation protein no 0.43
    16 GFF5878 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) no 0.42
    17 GFF7354 1,2-phenylacetyl-CoA epoxidase, subunit B (EC 1.14.13.149) no 0.42
    18 GFF4651 Kynurenine 3-monooxygenase (EC 1.14.13.9) no 0.42
    19 GFF1348 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.41
    20 GFF2252 RNA-2',3'-PO4:RNA-5'-OH ligase 0.27 0.41

    Or look for negative cofitness