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  • Top cofit genes for PS417_26560 from Pseudomonas simiae WCS417

    amino acid dehydrogenase
    SEED: D-amino acid dehydrogenase small subunit (EC 1.4.99.1)
    KEGG: D-amino-acid dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_08830 membrane protein 0.19 0.27
    2 PS417_00575 LysR family transcriptional regulator no 0.26
    3 PS417_27815 hypothetical protein 0.16 0.25
    4 PS417_17800 microcin B17-processing protein McbD 0.17 0.25
    5 PS417_14390 acyl-homoserine lactone acylase subunit beta no 0.24
    6 PS417_20105 glycosyl transferase no 0.24
    7 PS417_10420 shikimate dehydrogenase 0.54 0.24
    8 PS417_20095 hypothetical protein no 0.23
    9 PS417_19790 ATP synthase 0.44 0.23
    10 PS417_14485 malto-oligosyltrehalose trehalohydrolase 0.32 0.22
    11 PS417_01955 peptidase 0.36 0.22
    12 PS417_19880 flagellar basal body L-ring protein 0.29 0.22
    13 PS417_19765 flagellar hook-length control protein no 0.22
    14 PS417_19745 flagellar assembly protein FliO no 0.22
    15 PS417_19885 flagellar basal body rod protein FlgG 0.40 0.22
    16 PS417_20090 DegT/DnrJ/EryC1/StrS aminotransferase no 0.22
    17 PS417_19785 flagellar biogenesis protein no 0.21
    18 PS417_14210 hypothetical protein no 0.21
    19 PS417_10655 LuxR family transcriptional regulator no 0.21
    20 PS417_19840 flagellar cap protein FliD no 0.21

    Or look for negative cofitness