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  • Top cofit genes for PS417_26555 from Pseudomonas simiae WCS417

    endoribonuclease L-PSP
    SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_28145 AraC family transcriptional regulator no 0.24
    2 PS417_07760 hypothetical protein no 0.23
    3 PS417_03025 penicillin-binding protein 1C no 0.23
    4 PS417_09890 hypothetical protein no 0.22
    5 PS417_11815 XoxI no 0.22
    6 PS417_10925 malonate-semialdehyde dehydrogenase (acetylating) (EC 1.2.1.18) (from data) no 0.22
    7 PS417_17510 histidine kinase no 0.21
    8 PS417_17365 galactaro-1,5-lactonase (from data) no 0.21
    9 PS417_14165 ArsR family transcriptional regulator no 0.20
    10 PS417_28055 peptidase no 0.20
    11 PS417_02605 IMP dehydrogenase no 0.20
    12 PS417_00195 hypothetical protein no 0.20
    13 PS417_22845 membrane protein no 0.20
    14 PS417_25750 polyamine ABC transporter substrate-binding protein no 0.19
    15 PS417_24155 ATP-binding protein no 0.19
    16 PS417_11850 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92); possible 5-dehydro-2-deoxyphosphogluconate aldolase DUF2090 (EC 4.1.2.29) (from data) no 0.19
    17 PS417_17620 biotin synthase no 0.19
    18 PS417_18285 multidrug transporter no 0.19
    19 PS417_19135 DeoR faimly transcriptional regulator no 0.19
    20 PS417_04055 peptide transporter no 0.19

    Or look for negative cofitness